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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813839.1_cds_XP_016497711.1_11809
CDS Infomation

[gene=LOC107816503] [db_xref=GeneID:107816503] [protein=probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X3] [protein_id=XP_016497711.1] [location=complement(join(1327..1605,1912..2041,2998..3075,3578..3723,5896..6156,6388..6636,6893..7030,7482..7580,8641..8823))] [gbkey=CDS]
Sequence

ATGCTGTATGGAGATGCAAAAGGATGGGCAAAGAGAACTTGTTCTTTCTTGCATCCATAT
ATTCCTGGTGTCATGAATCCTCATGCGAAGATTGTCCAGAAGTGGAACAAATTTTTTGTC
ATCTCATGCCTATTTGCAGTATTTATAGATCCCCTGTTCTTCTTTTTGCTTTATGTCCAA
CAGGGAAACAAATGTATAGTACTAAATTGGCCCATGACAACAACTATTGTGATTTTGAGG
AGCATCACTGATATCGTTTACTTAGTTCACATCCTTCTTCAGTTCCGCTTAGCTTATGTT
GCTCCTGAATCTAGGGTGGTGGGAGCAGGTGACCTGGTTGACCACCCTAAAAAGATTGCT
ATAAATTATCTTTCTGGATACTTTGTCCATGACTTCTTCATCGTACTACCACTTCCTCAG
ATCATCATATTATTGGTTTTGCCCAAGTCTATTGCATCATCTGGGGCAAATTACGCGAAG
AATCTATTGAGGGCAGCTATACTACTCCAGTATATTCCTAGGTTGTACAGGTTTTTGCCT
TTGCTAGCTGGCCAGTCTCCAAGTGGTTTTATATTTGAGTCAGCATGGGCAAATTTTGTC
ATAAATCTTCTCACTTTTGTTCTATCGAGCCATGTGGTGGGATCATGCTGGTATCTTTTT
GGTTTACAGAGGGTGAATCAATGCCTTCGAGATGCTTGTCGTAGCTCAAACATAGCAAGA
TGTACGGAATTCATAGACTGTGGTCATGGCACCGATTTCAGAAAGTTTCGGTCGGATACA
ACATGGGACCAGTGGAAGAACAATTCTGATGCAGTTACTTGTTTTACTAATGGTGGTTTT
GACTATGGAATTTATGAACAAGCTGTTAATCTAACCGCTGAAGGGAGTGTTGTCACAAGA
TATGTGTACTCATTGTTTTGGGGCTTCCAGCAAATTAGTACACTAGCTGGCAATCAAATC
CCGAGTTATTTTGTGTGGGAAGTTATTTTCACAATGGCTATAATCGGAATGGGACTCCTA
CTTTTTGCCCTCCTGATTGGAAATATGCAAAACTTTCTGCAGTCTCTAGATCGCAGGAGG
TTAGAAATGTCTCTGAGACGTCGTGACGTTGAACAATGGATGAGCCATAGGCGCTTGCCA
GAAGAACTGAGAAGGAGAGTTCGGGAGGCAGAGAGATATAATTGGGCCGCTACCAGAGGG
GTCAATGAAGAAATGCTACTAGAGAACCTTCCTGAAGACCTTCTAAGAGATATACGGAGA
CATCTTTTTAACTTCATCAAAAAGGTTCGGATATTTGCACTTCTAGATGAACCCATCATA
GATGCCATCTGTGAGAGATTAAGACAGAAAACATACATAGCAGGAAGCAAAGTTTTATAC
CGTGGTGGTCTGGTTGACAAAATGGTTTTCATAATTCGGGGTAAGATGGAAAGTATTGGA
GAAGATGGAAACGTGGCCTCCTTGTCTGAAGGGGATGCCTGCGGGGAAGAACTCCTCACA
TGGTGCCTTGAGCACTCTTCGATAAACAGAGGTGATATAGATCTTTTGAAAATTGTCTTG
TGA

Peptide Sequence

PEP ID

XP_016497711.1
PEP Infomation

PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X3 [Nicotiana tabacum]
Sequence

MLYGDAKGWAKRTCSFLHPYIPGVMNPHAKIVQKWNKFFVISCLFAVFIDPLFFFLLYVQ
QGNKCIVLNWPMTTTIVILRSITDIVYLVHILLQFRLAYVAPESRVVGAGDLVDHPKKIA
INYLSGYFVHDFFIVLPLPQIIILLVLPKSIASSGANYAKNLLRAAILLQYIPRLYRFLP
LLAGQSPSGFIFESAWANFVINLLTFVLSSHVVGSCWYLFGLQRVNQCLRDACRSSNIAR
CTEFIDCGHGTDFRKFRSDTTWDQWKNNSDAVTCFTNGGFDYGIYEQAVNLTAEGSVVTR
YVYSLFWGFQQISTLAGNQIPSYFVWEVIFTMAIIGMGLLLFALLIGNMQNFLQSLDRRR
LEMSLRRRDVEQWMSHRRLPEELRRRVREAERYNWAATRGVNEEMLLENLPEDLLRDIRR
HLFNFIKKVRIFALLDEPIIDAICERLRQKTYIAGSKVLYRGGLVDKMVFIIRGKMESIG
EDGNVASLSEGDACGEELLTWCLEHSSINRGDIDLLKIVL

Transcript Sequence

Gene sequence data has not been registered.